This is an infographic showing different fish and their sensitivity to 6PPD-quinone, on a logarithmic scale.
Prarthana Shankar, Ph.D.
Prarthana (pronounced: Praa-th-na) is a Biologist at the Western Fisheries Research Center interested in the toxicological effects of chemical exposure to fish health. Her current research examines stormwater toxicity in salmonids at various life stages, with a particular focus on 6PPD and its transformation products such as 6PPD-quinone.
Prior to coming to the USGS, Prarthana utilized zebrafish as a model organism to investigate the developmental toxicity of different environmental chemicals such as polycyclic aromatic hydrocarbons (PAHs), Per- and polyfluoroalkyl substances (PFASs), 2,3,7,8-Tetrachlorodibenzodioxin (TCDD), and uranium. Her research leveraged techniques such as whole-animal transcriptomics and proteomics, behavioral assays at different zebrafish life stages, and CRISPR Cas9 and Cas12a to generate various gene knockout animals. She also has experience building Adverse Outcome Pathways (AOPs) specifically related to the Aryl hydrocarbon receptor.
Prarthana began working at the USGS in February 2023. Along with John Hansen’s group, she plans to investigate 6PPD-quinone toxicity in different salmonids native to the Pacific Northwest including, coho salmon and cutthroat trout. Her research questions focus on identifying the mechanisms of 6PPD-quinone toxicity and understanding the sublethal immune system effects from exposure to this emerging contaminant of concern.
Professional Experience
2023 – Present: Biologist, U.S. Geological Survey, Western Fisheries Research Center, Seattle, WA.
2021 – 2023: Postdoctoral Fellow, U.S. Environmental Protection Agency, Great Lakes Toxicology and Ecology Division, Duluth, MN.
2021 – 2022: Research Contractor, Health and Environmental Sciences Institute.
2016: Student employee, Southern California Coastal Water Research Project, Toxicology Lab, Costa Mesa, CA.
Education and Certifications
2016 - 2021: Ph.D. in Environmental and Molecular Toxicology, Oregon State University, Corvallis, OR.
2011 - 2016: B.S. Biological Science (concentration: Molecular Biology and Biotechnology); Minor in Chemistry, California State University Fullerton, Fullerton, CA.
Affiliations and Memberships*
2022 – 2023: Society of Environmental Toxicology and Chemistry (SETAC)
2017 – 2022: Society of Toxicology (SOT)
2019 – 2021: Teratology Society
Honors and Awards
2020: Pacific Northwest Association of Toxicologists (PANWAT Regional Chapter). Best Graduate Student Oral Presentation Award.
2020: Carl C. Smith Graduate Student Award, Finalist. Society of Toxicology (SOT).
2019: National Superfund Research Program (SRP) Annual Meeting. Best Graduate Student Poster Award for Health Sciences.
2019: PANWAT Annual Meeting. Best Graduate Student Oral Presentation Award.
2019: Teratology Annual Meeting. James C. Bradford Memorial Student Poster Award.
2018: National SRP Annual Meeting. Best Graduate Student Poster Award for Health Sciences.
2018: PANWAT Annual Meeting. Best Graduate Student Poster Award.
2018: Molecular and Systems Biology Specialty Section, SOT. Graduate Student Award.
2018: 30th Year Celebration of Superfund Research Center at UC Berkeley, CA. Best Visiting Trainee Poster Award.
2016: West Coast Biological Undergraduate Research Conference (WCBSURC). Best Seminar Talk Award in the Marine and Aquatic Science Seminar.
2015: Society for Integrative and Comparative Biology’s (SICB) Southwestern Organismal Biology Meeting. Best Undergraduate Talk Award.
2014: Society for Advancement of Hispanics/Chicano and Native Americans in Science (SACNAS) conference. Best Poster Award.
Abstracts and Presentations
Shankar, P., Cavallin J.E., Ellman, M.E., Santana Rodriguez, K.J., Lasee, S., Blackwell B.R., Vliet, S.M., LaLone, C., Villeneuve, D.L., Comparison of Zebrafish Toxicity Between Different Developmental Windows of Exposure to Three Environmentally Relevant PFAS Compounds. Poster Presentation at the Society of Environmental Toxicology and Chemistry (SETAC) North America Annual Meeting. Nov 17th, 202
Shankar, P.*, Cavallin J.E., Ellman, M.E., Santana Rodriguez, K.J., Lasee, S., Blackwell B.R., Vliet, S.M., LaLone, C., Villeneuve, D.L., Comparison of zebrafish toxicity between different developmental windows of exposure to three environmentally relevant PFAS compounds. Oral Presentation at the Midwest Society of Toxicology (SOT) Regional Chapter. Virtual. April 29th, 2022.
Shankar, P.*, Villeneuve, D.L., AOP Development: Bridging Aryl Hydrocarbon Receptor activation with craniofacial and cardiac malformations using a Key Event Relationship (KER)-by-KER approach. Poster Presentation at the SOT Annual Meeting, San Diego, California. March 30th, 2022.
Cheng, V.*, Corton C.J., Bushel, P.J., Ellinger-Zigelbauer, H., Estrella, H., Gosink, M., Podtelezhnikov, A., Tanis, K.Q., Mitchell, C.A., Shankar, P., Sistare, F.D. A Collaborative Initiative to Establish Molecular Biomarkers for Assessing Risk of Chemical Carcinogenesis to Reduce Reliance on Conventional Rodent Carcinogenicity Studies. Poster Presentation at the SOT Annual Meeting, San Diego, Ca
Shankar, P.*, Villeneuve, D.L., Bridging Aryl Hydrocarbon Receptor Activation with Craniofacial Malformations using a Key Event Relationship (KER) by KER Approach. Oral Presentation at the AOP Work-In-Progress Monthly Seminar Series (US Environmental Protection Agency (EPA)). Virtual. Jan 19th, 2022.
Shankar, P.*, Corton C.J., Bushel, P.J., Ellinger-Zigelbauer, H., Fostel, J.M., Podtelezhnikov, A., Tanis, K.Q., Mitchell, C.A., Sistare, F.D A Collaborative Initiative to Establish Molecular Biomarkers for Assessing Risk of Chemical Carcinogenesis to Reduce Reliance on Conventional Rodent Carcinogenicity Studies. Poster Presentation at the Environmental Mutagenesis and Genomics Society Annual Mee
Shankar, P.*, Elucidating the signaling events downstream of aryl hydrocarbon receptor (AHR) activation in zebrafish. Oral Presentation at the Great Lakes Toxicology and Ecology Division (GLTED) of the US EPA Weekly Seminar Series, Virtual. May 26th, 2021.
Science and Products
Evaluation of Lethal and Sublethal Effects of 6PPDQ on Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) (ver. 2.0, March 2025) Evaluation of Lethal and Sublethal Effects of 6PPDQ on Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) (ver. 2.0, March 2025)
This is an infographic showing different fish and their sensitivity to 6PPD-quinone, on a logarithmic scale.

WFRC scientists, Spokane fish health scientist and Spokane Tribal intern conduct virus exposures in the WFRC Seattle web lab
linkDr. Gael Kurath, Joanne Salzer and Bill Batts joining Spokane fish health scientist Rebecca Cook and Spokane Tribal intern Justine Flett to conduct virus exposures in the WFRC Seattle weblab.
WFRC scientists, Spokane fish health scientist and Spokane Tribal intern conduct virus exposures in the WFRC Seattle web lab
linkDr. Gael Kurath, Joanne Salzer and Bill Batts joining Spokane fish health scientist Rebecca Cook and Spokane Tribal intern Justine Flett to conduct virus exposures in the WFRC Seattle weblab.
Non-USGS Publications**
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Science and Products
Evaluation of Lethal and Sublethal Effects of 6PPDQ on Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) (ver. 2.0, March 2025) Evaluation of Lethal and Sublethal Effects of 6PPDQ on Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) (ver. 2.0, March 2025)
This is an infographic showing different fish and their sensitivity to 6PPD-quinone, on a logarithmic scale.
This is an infographic showing different fish and their sensitivity to 6PPD-quinone, on a logarithmic scale.

WFRC scientists, Spokane fish health scientist and Spokane Tribal intern conduct virus exposures in the WFRC Seattle web lab
linkDr. Gael Kurath, Joanne Salzer and Bill Batts joining Spokane fish health scientist Rebecca Cook and Spokane Tribal intern Justine Flett to conduct virus exposures in the WFRC Seattle weblab.
WFRC scientists, Spokane fish health scientist and Spokane Tribal intern conduct virus exposures in the WFRC Seattle web lab
linkDr. Gael Kurath, Joanne Salzer and Bill Batts joining Spokane fish health scientist Rebecca Cook and Spokane Tribal intern Justine Flett to conduct virus exposures in the WFRC Seattle weblab.
Non-USGS Publications**
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
*Disclaimer: Listing outside positions with professional scientific organizations on this Staff Profile are for informational purposes only and do not constitute an endorsement of those professional scientific organizations or their activities by the USGS, Department of the Interior, or U.S. Government